STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26640.1BarH-like protein. (409 aa)    
Predicted Functional Partners:
kstR2_3
Transcriptional regulator, TetR family.
 
     0.886
ALI26638.1
Hypothetical protein.
 
 
  0.846
ALI26639.1
Acyl-CoA dehydrogenase, short-chain specific.
 
 
  0.808
ALI28051.1
BarH-like protein.
  
     0.770
ALI28011.1
Hypothetical protein.
 
     0.767
ALI28006.1
Hypothetical protein.
 
   
 0.742
ALI25107.1
Hypothetical protein.
 
    0.737
ALI27997.1
Hypothetical protein.
 
     0.737
ALI24079.1
Hypothetical protein.
 
     0.679
ALI26063.1
Butyryl-CoA dehydrogenase.
 
 
  0.660
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.