STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpB_1Organosulfonate ABC transporter permease protein. (286 aa)    
Predicted Functional Partners:
ssuA_1
Organosulfonate ABC transporter substrate-binding protein.
 
  
 0.983
ssuB_1
Organosulfonate ABC transporter ATP-binding protein.
  
 0.983
sdhA_2
Putative reductase; Alkanesulfonate metabolism.
 
    0.971
ALI26685.1
Adenylylsulfate reductase beta-subunit.
 
     0.965
ALI26684.1
Putative alkanesulfonate metabolism utilization regulator.
 
  
 0.923
tauB
TauB.
  
 0.868
ssuB
SsuB-like protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.849
ssuB_5
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 0.839
ALI24521.1
ABC transporter.
  
 0.835
tauA
TauA.
 
  
 0.801
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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