STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26774.1Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (417 aa)    
Predicted Functional Partners:
sufC
SufC.
  
 0.999
sufB
SufB.
 
 0.998
nifU
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
 
 0.998
sufD
SufD.
 
 
 0.995
ALI26776.1
PaaD-like protein; (DUF59) involved in Fe-S cluster assembly.
 
  
 0.983
trxB
Thioredoxin reductase.
 
 
 0.933
ALI25367.1
Thioredoxin reductase.
  
 
 0.917
metB
Cystathionine gamma-lyase.
    
 0.911
trxA
Thioredoxin.
  
 
  0.906
trx-2
Thioredoxin; Belongs to the thioredoxin family.
  
 
  0.906
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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