STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26798.1YbbK-like protein. (144 aa)    
Predicted Functional Partners:
qmcA_1
YbbK-like protein.
 
  
 0.934
ALI26797.1
Hypothetical protein.
 
   
 0.866
ALI27398.1
Cobalt-precorrin-2 C20-methyltransferase; Cobalt-precorrin-3b C17-methyltransferase; Belongs to the precorrin methyltransferase family.
  
    0.731
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
    0.730
yqiK
YqiK.
  
  
 0.654
ALI25007.1
Transmembrane protein.
  
    0.576
cobM
Cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.534
qmcA_3
Putative stomatin/prohibitin-family membrane protease subunit.
 
  
 0.490
ALI26800.1
Hypothetical protein.
       0.472
ALI26801.1
Hypothetical protein.
       0.472
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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