STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI26914.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
ALI29353.1
Hypothetical protein.
 
     0.738
ALI25351.1
Putative ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE LEUCINE AND VALINE RICH PROTEIN ABC TRANSPORTER.
  
     0.706
ALI25352.1
Putative antibiotic-transport protein; ABC transporter.
  
     0.695
ALI25693.1
Hypothetical protein.
  
     0.686
ALI26915.1
Hypothetical protein.
       0.655
ALI24204.1
Putative CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN PAPA2.
  
     0.622
ALI25151.1
Hypothetical protein.
  
     0.599
ALI28593.1
Integrase.
  
     0.590
ALI24916.1
Transcriptional regulator, MarR family.
  
     0.584
ALI26913.1
Hypothetical protein.
       0.581
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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