STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALI27033.1Chitinase C precursor. (142 aa)    
Predicted Functional Partners:
ALI28565.1
Beta-glucanase, putative.
 
   
 0.716
ALI27220.1
Hypothetical protein.
 
     0.670
ALI24442.1
Glycoside hydrolase family protein.
 
   
 0.656
ALI24420.1
ESX-3 secretion system protein EccD3.
  
     0.632
ALI25197.1
Hypothetical protein.
  
     0.602
ALI24483.1
Hypothetical protein.
  
   
 0.596
ALI27101.1
Putative EXPORTED PROTEIN.
 
 
 0.575
ALI29866.1
Putative membrane protein.
  
     0.551
mbtD
MbtD.
 
    0.549
ALI27034.1
Hypothetical protein.
     
 0.531
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.