Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI27037.1 | ALI27038.1 | XA26_32080 | XA26_32090 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.440 |
ALI27037.1 | ALI27039.1 | XA26_32080 | XA26_32100 | Hypothetical protein. | Putative ESX-1 secretion system. | 0.453 |
ALI27037.1 | ALI27040.1 | XA26_32080 | XA26_32110 | Hypothetical protein. | Putative protein-S-isoprenylcysteine methyltransferase. | 0.438 |
ALI27038.1 | ALI27037.1 | XA26_32090 | XA26_32080 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.440 |
ALI27038.1 | ALI27039.1 | XA26_32090 | XA26_32100 | Transcriptional regulator, ArsR family. | Putative ESX-1 secretion system. | 0.942 |
ALI27038.1 | ALI27040.1 | XA26_32090 | XA26_32110 | Transcriptional regulator, ArsR family. | Putative protein-S-isoprenylcysteine methyltransferase. | 0.781 |
ALI27039.1 | ALI27037.1 | XA26_32100 | XA26_32080 | Putative ESX-1 secretion system. | Hypothetical protein. | 0.453 |
ALI27039.1 | ALI27038.1 | XA26_32100 | XA26_32090 | Putative ESX-1 secretion system. | Transcriptional regulator, ArsR family. | 0.942 |
ALI27039.1 | ALI27040.1 | XA26_32100 | XA26_32110 | Putative ESX-1 secretion system. | Putative protein-S-isoprenylcysteine methyltransferase. | 0.798 |
ALI27039.1 | ALI27766.1 | XA26_32100 | XA26_39520 | Putative ESX-1 secretion system. | Acetyltransferase, GNAT family. | 0.420 |
ALI27039.1 | ALI27840.1 | XA26_32100 | XA26_40300 | Putative ESX-1 secretion system. | Hypothetical protein. | 0.415 |
ALI27039.1 | cmk | XA26_32100 | XA26_34700 | Putative ESX-1 secretion system. | Cytidylate kinase. | 0.404 |
ALI27039.1 | czcD | XA26_32100 | XA26_07130 | Putative ESX-1 secretion system. | CzcD. | 0.429 |
ALI27039.1 | mdh | XA26_32100 | XA26_18340 | Putative ESX-1 secretion system. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.680 |
ALI27040.1 | ALI27037.1 | XA26_32110 | XA26_32080 | Putative protein-S-isoprenylcysteine methyltransferase. | Hypothetical protein. | 0.438 |
ALI27040.1 | ALI27038.1 | XA26_32110 | XA26_32090 | Putative protein-S-isoprenylcysteine methyltransferase. | Transcriptional regulator, ArsR family. | 0.781 |
ALI27040.1 | ALI27039.1 | XA26_32110 | XA26_32100 | Putative protein-S-isoprenylcysteine methyltransferase. | Putative ESX-1 secretion system. | 0.798 |
ALI27766.1 | ALI27039.1 | XA26_39520 | XA26_32100 | Acetyltransferase, GNAT family. | Putative ESX-1 secretion system. | 0.420 |
ALI27840.1 | ALI27039.1 | XA26_40300 | XA26_32100 | Hypothetical protein. | Putative ESX-1 secretion system. | 0.415 |
cmk | ALI27039.1 | XA26_34700 | XA26_32100 | Cytidylate kinase. | Putative ESX-1 secretion system. | 0.404 |
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