STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI27124.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
ALI25172.1
7-alpha-hydroxysteroid dehydrogenase.
 
    0.666
baiE_2
Bile acid 7-alpha dehydratase BaiE.
 
     0.652
ALI24328.1
Hypothetical protein.
 
     0.630
ALI27123.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
  
    0.604
ALI24779.1
Hypothetical protein.
 
     0.593
ALI24329.1
Hypothetical protein.
 
     0.588
ALI29078.1
Hypothetical protein.
 
     0.576
ALI24850.1
4-carboxymuconolactone decarboxylase.
 
     0.551
ALI28353.1
Hypothetical protein.
 
     0.540
ALI26434.1
Hypothetical protein.
 
     0.513
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.