Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI27312.1 | ALI27313.1 | XA26_34860 | XA26_34870 | RNA binding methyltransferase FtsJ like. | Hypothetical protein. | 0.905 |
ALI27312.1 | ALI27314.1 | XA26_34860 | XA26_34880 | RNA binding methyltransferase FtsJ like. | 4-nitrophenylphosphatase. | 0.896 |
ALI27312.1 | ALI27315.1 | XA26_34860 | XA26_34890 | RNA binding methyltransferase FtsJ like. | TPR-repeat-containing protein. | 0.900 |
ALI27312.1 | ALI29667.1 | XA26_34860 | XA26_58840 | RNA binding methyltransferase FtsJ like. | Nicotinamidase. | 0.815 |
ALI27312.1 | gidB | XA26_34860 | XA26_61030 | RNA binding methyltransferase FtsJ like. | GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.841 |
ALI27312.1 | gyrA | XA26_34860 | XA26_00080 | RNA binding methyltransferase FtsJ like. | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.827 |
ALI27312.1 | ppnK | XA26_34860 | XA26_34850 | RNA binding methyltransferase FtsJ like. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.986 |
ALI27312.1 | recN | XA26_34860 | XA26_34840 | RNA binding methyltransferase FtsJ like. | RecN; May be involved in recombinational repair of damaged DNA. | 0.915 |
ALI27312.1 | rpoB | XA26_34860 | XA26_13940 | RNA binding methyltransferase FtsJ like. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.816 |
ALI27312.1 | whiB-4 | XA26_34860 | XA26_19630 | RNA binding methyltransferase FtsJ like. | WhiB-family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.814 |
ALI27313.1 | ALI27312.1 | XA26_34870 | XA26_34860 | Hypothetical protein. | RNA binding methyltransferase FtsJ like. | 0.905 |
ALI27313.1 | ALI27314.1 | XA26_34870 | XA26_34880 | Hypothetical protein. | 4-nitrophenylphosphatase. | 0.944 |
ALI27313.1 | ALI27315.1 | XA26_34870 | XA26_34890 | Hypothetical protein. | TPR-repeat-containing protein. | 0.944 |
ALI27313.1 | ppnK | XA26_34870 | XA26_34850 | Hypothetical protein. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.949 |
ALI27313.1 | recN | XA26_34870 | XA26_34840 | Hypothetical protein. | RecN; May be involved in recombinational repair of damaged DNA. | 0.949 |
ALI27314.1 | ALI27312.1 | XA26_34880 | XA26_34860 | 4-nitrophenylphosphatase. | RNA binding methyltransferase FtsJ like. | 0.896 |
ALI27314.1 | ALI27313.1 | XA26_34880 | XA26_34870 | 4-nitrophenylphosphatase. | Hypothetical protein. | 0.944 |
ALI27314.1 | ALI27315.1 | XA26_34880 | XA26_34890 | 4-nitrophenylphosphatase. | TPR-repeat-containing protein. | 0.995 |
ALI27314.1 | ppnK | XA26_34880 | XA26_34850 | 4-nitrophenylphosphatase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.944 |
ALI27314.1 | recN | XA26_34880 | XA26_34840 | 4-nitrophenylphosphatase. | RecN; May be involved in recombinational repair of damaged DNA. | 0.939 |
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