Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24572.1 | ALI26767.1 | XA26_07120 | XA26_29320 | Hypothetical protein. | ABC-type multidrug transport system, permease component. | 0.551 |
ALI24572.1 | ALI27359.1 | XA26_07120 | XA26_35360 | Hypothetical protein. | Metallo-beta-lactamase superfamily protein. | 0.532 |
ALI26767.1 | ALI24572.1 | XA26_29320 | XA26_07120 | ABC-type multidrug transport system, permease component. | Hypothetical protein. | 0.551 |
ALI26767.1 | ALI27359.1 | XA26_29320 | XA26_35360 | ABC-type multidrug transport system, permease component. | Metallo-beta-lactamase superfamily protein. | 0.479 |
ALI27359.1 | ALI24572.1 | XA26_35360 | XA26_07120 | Metallo-beta-lactamase superfamily protein. | Hypothetical protein. | 0.532 |
ALI27359.1 | ALI26767.1 | XA26_35360 | XA26_29320 | Metallo-beta-lactamase superfamily protein. | ABC-type multidrug transport system, permease component. | 0.479 |
ALI27359.1 | ALI27752.1 | XA26_35360 | XA26_39380 | Metallo-beta-lactamase superfamily protein. | Oxidoreductase; Flavoprotein. | 0.586 |
ALI27359.1 | ALI29317.1 | XA26_35360 | XA26_55260 | Metallo-beta-lactamase superfamily protein. | Zn-dependent hydrolase; Family includes glyoxylases. | 0.558 |
ALI27359.1 | ALI29604.1 | XA26_35360 | XA26_58190 | Metallo-beta-lactamase superfamily protein. | Sulfurtransferase; Rhodanese-related. | 0.427 |
ALI27359.1 | moeZ_3 | XA26_35360 | XA26_27760 | Metallo-beta-lactamase superfamily protein. | Sulfurtransferase; Rhodanese-related. | 0.443 |
ALI27359.1 | mutM_3 | XA26_35360 | XA26_13520 | Metallo-beta-lactamase superfamily protein. | Formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.519 |
ALI27359.1 | uvrA | XA26_35360 | XA26_35350 | Metallo-beta-lactamase superfamily protein. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.794 |
ALI27359.1 | ybeY | XA26_35360 | XA26_39100 | Metallo-beta-lactamase superfamily protein. | Metal-dependent hydrolase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.408 |
ALI27359.1 | ygaP | XA26_35360 | XA26_39390 | Metallo-beta-lactamase superfamily protein. | Hypothetical protein. | 0.439 |
ALI27752.1 | ALI27359.1 | XA26_39380 | XA26_35360 | Oxidoreductase; Flavoprotein. | Metallo-beta-lactamase superfamily protein. | 0.586 |
ALI27752.1 | ALI29317.1 | XA26_39380 | XA26_55260 | Oxidoreductase; Flavoprotein. | Zn-dependent hydrolase; Family includes glyoxylases. | 0.586 |
ALI27752.1 | ygaP | XA26_39380 | XA26_39390 | Oxidoreductase; Flavoprotein. | Hypothetical protein. | 0.804 |
ALI29317.1 | ALI27359.1 | XA26_55260 | XA26_35360 | Zn-dependent hydrolase; Family includes glyoxylases. | Metallo-beta-lactamase superfamily protein. | 0.558 |
ALI29317.1 | ALI27752.1 | XA26_55260 | XA26_39380 | Zn-dependent hydrolase; Family includes glyoxylases. | Oxidoreductase; Flavoprotein. | 0.586 |
ALI29317.1 | ALI29604.1 | XA26_55260 | XA26_58190 | Zn-dependent hydrolase; Family includes glyoxylases. | Sulfurtransferase; Rhodanese-related. | 0.451 |
page 1 of 3