STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI27482.1Signal transduction histidine kinase CitA regulating citrate metabolism. (525 aa)    
Predicted Functional Partners:
ALI27483.1
Response regulator CitB of citrate metabolism.
   
 0.958
ALI27481.1
TctC citrate transporter.
 
   
 0.880
ALI27480.1
TctB citrate transporter.
 
   
 0.878
ALI27479.1
TctA citrate transporter.
 
   
 0.854
ALI28268.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; 2-oxoglutarate dehydrogenase E1 component.
  
 0.843
ALI26278.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
  
 0.813
ALI28537.1
Putative response regulator.
 
   
 0.801
ALI29258.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
 0.794
ALI24909.1
SphR-like protein.
 
 
 0.627
ALI27485.1
Putative cytochrome P450 hydroxylase.
   
 
 0.614
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.