STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI27483.1Response regulator CitB of citrate metabolism. (217 aa)    
Predicted Functional Partners:
ALI27482.1
Signal transduction histidine kinase CitA regulating citrate metabolism.
   
 0.958
ALI28536.1
Putative sensor kinase citA.
 
 0.935
ALI27481.1
TctC citrate transporter.
 
    0.895
ALI27479.1
TctA citrate transporter.
 
     0.837
ALI27480.1
TctB citrate transporter.
 
     0.797
uspA
UspA.
     
 0.611
ALI24062.1
Sensor histidine kinase.
 
   
 0.573
ALI29011.1
PhoR-like protein.
 
   
 0.564
ALI27485.1
Putative cytochrome P450 hydroxylase.
       0.530
ALI28236.1
Osmosensitive K+ channel histidine kinase KdpD.
 
   
 0.513
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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