STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI27638.1Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
ALI27639.1
Transcriptional regulator, TetR family.
 
     0.815
ALI29139.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 0.733
ALI24671.1
Hypothetical protein.
 
 
 0.688
ALI26794.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 0.638
ALI29138.1
Oxidoreductase, short chain dehydrogenase-reductase family.
 
 
 0.608
ALI25650.1
Oxidoreductase, short chain dehydrogenase/reductase family.
 
     0.588
fabG_13
Oxidoreductase, short chain dehydrogenase/reductase family.
 
 
 0.587
ALI24672.1
Hypothetical protein.
 
 
 0.566
ALI24992.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
 0.566
ALI29124.1
Short-chain dehydrogenase/reductase SDR.
 
 
 0.551
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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