STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapB_2Hypothetical protein. (350 aa)    
Predicted Functional Partners:
ALI26306.1
Hypothetical protein.
 
     0.595
ALI27579.1
Hypothetical protein.
  
     0.585
qmcA_2
Putative stomatin/prohibitin-family membrane protease subunit.
       0.529
ALI27165.1
Hypothetical protein.
  
     0.512
ALI24405.1
Transcriptional regulator, TetR family.
  
     0.502
baiE_1
Bile acid 7a-dehydratase.
 
     0.497
ALI24850.1
4-carboxymuconolactone decarboxylase.
 
     0.488
baiE_2
Bile acid 7-alpha dehydratase BaiE.
 
     0.459
ALI24363.1
Hypothetical protein.
  
     0.441
ALI28880.1
MCE-family protein Mce1F.
  
     0.426
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.