Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI25521.1 | ALI26098.1 | XA26_16740 | XA26_22530 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.731 |
ALI25521.1 | ALI26108.1 | XA26_16740 | XA26_22630 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.726 |
ALI25521.1 | ALI27830.1 | XA26_16740 | XA26_40180 | Hypothetical protein. | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | 0.721 |
ALI25521.1 | ALI27846.1 | XA26_16740 | XA26_40360 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.440 |
ALI25521.1 | ALI29556.1 | XA26_16740 | XA26_57710 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.412 |
ALI26098.1 | ALI25521.1 | XA26_22530 | XA26_16740 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.731 |
ALI26098.1 | ALI26108.1 | XA26_22530 | XA26_22630 | Transcriptional regulator, HxlR family. | Transcriptional regulator, TetR family. | 0.737 |
ALI26098.1 | ALI27830.1 | XA26_22530 | XA26_40180 | Transcriptional regulator, HxlR family. | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | 0.729 |
ALI26098.1 | ALI27846.1 | XA26_22530 | XA26_40360 | Transcriptional regulator, HxlR family. | Transcriptional regulator, TetR family. | 0.467 |
ALI26108.1 | ALI25521.1 | XA26_22630 | XA26_16740 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.726 |
ALI26108.1 | ALI26098.1 | XA26_22630 | XA26_22530 | Transcriptional regulator, TetR family. | Transcriptional regulator, HxlR family. | 0.737 |
ALI26108.1 | ALI27830.1 | XA26_22630 | XA26_40180 | Transcriptional regulator, TetR family. | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | 0.751 |
ALI26108.1 | ALI27846.1 | XA26_22630 | XA26_40360 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.695 |
ALI26108.1 | ALI29556.1 | XA26_22630 | XA26_57710 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.500 |
ALI27710.1 | ALI27846.1 | XA26_38960 | XA26_40360 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, TetR family. | 0.445 |
ALI27710.1 | ALI29556.1 | XA26_38960 | XA26_57710 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, TetR family. | 0.467 |
ALI27830.1 | ALI25521.1 | XA26_40180 | XA26_16740 | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.721 |
ALI27830.1 | ALI26098.1 | XA26_40180 | XA26_22530 | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, HxlR family. | 0.729 |
ALI27830.1 | ALI26108.1 | XA26_40180 | XA26_22630 | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, TetR family. | 0.751 |
ALI27830.1 | ALI27846.1 | XA26_40180 | XA26_40360 | Hydrogen peroxide-inducible activator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, TetR family. | 0.443 |
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