STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI27997.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
livM
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.973
livH
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.968
livG
Branched-chain amino acid transport ATP-binding protein LivG.
  
 
 0.959
livF
Branched-chain amino acid transport ATP-binding protein LivF.
  
 
 0.946
ALI27995.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
     0.916
ALI26940.1
Branched-chain amino acid ABC transporter; Amino acid-binding protein.
     
  0.900
ALI27996.1
Hypothetical protein.
       0.889
ALI28001.1
Transcriptional regulator, TetR family.
 
     0.825
ALI27999.1
Hypothetical protein.
 
     0.794
ALI28006.1
Hypothetical protein.
 
     0.762
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.