STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28018.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
ALI28020.1
Cytochrome p450-like protein.
 
     0.890
ALI28017.1
Luciferase-like monooxygenase superfamily.
 
     0.845
ALI28019.1
fdxD-like protein.
       0.749
ALI28006.1
Hypothetical protein.
 
     0.608
ALI27260.1
Transcriptional regulator, TetR family.
  
     0.553
ALI26308.1
Transcriptional regulator, TetR family.
 
     0.540
ALI26312.1
Transcriptional regulator, TetR family.
 
     0.537
ALI28011.1
Hypothetical protein.
 
     0.508
egtD
ABC transporter ATP-binding protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
  
    0.486
ALI28087.1
Hypothetical protein.
 
     0.481
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.