STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28077.1Putative oxidoreductase. (318 aa)    
Predicted Functional Partners:
ALI28076.1
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.795
ALI28078.1
B12 binding domain of Methylmalonyl-CoA mutase.
       0.795
scpA_3
Methylmalonyl-CoA mutase.
       0.795
ALI26642.1
Hypothetical protein.
  
   
 0.785
ALI25165.1
Putative Rif11-like protein.
  
     0.761
ALI26079.1
Hypothetical protein.
  
     0.760
ALI28017.1
Luciferase-like monooxygenase superfamily.
  
     0.747
ALI26333.1
Hypothetical protein.
  
     0.713
ALI27199.1
Oxidoreductase.
  
     0.712
ALI26086.1
N5,N10-methylenetetrahydromethanopterin reductase-like protein.
  
     0.700
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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