STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28195.1Dolichyl-phosphate-mannose-protein mannosyltransferase family. (645 aa)    
Predicted Functional Partners:
ALI28196.1
Glycosyl transferase.
  
 0.974
ALI28198.1
Sensor histidine kinase.
 
  
 0.758
ALI28199.1
Putative two-component system response regulator.
 
  
 0.693
ALI28197.1
Putative integral membrane protein.
 
    
0.632
ALI28194.1
Carbonic anhydrase.
       0.509
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.450
ALI29577.1
Putative CONSERVED INTEGRAL MEMBRANE PROTEIN; Belongs to the UbiA prenyltransferase family.
  
  
 0.434
ALI26584.1
Polysaccharide deacetylase family protein.
  
  
 0.432
ALI28242.1
Polysaccharide deacetylase, putative.
  
  
 0.432
ALI28481.1
Putative glycosyl hydrolase.
  
  
 0.432
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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