STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malFMalF. (297 aa)    
Predicted Functional Partners:
ugpC
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 
 0.999
ycjP
Inositol transport system permease protein.
 
 0.999
malE
MalE.
 
 0.999
ALI27691.1
Inositol transport system permease protein.
 
 0.985
uspC
UspC.
 
 
 0.894
ALI28276.1
Hypothetical protein.
       0.802
ALI28281.1
Hypothetical protein.
       0.742
ALI27859.1
Alpha-glucosidase.
 
  
 0.628
treS
Trehalose synthase.
  
  
 0.619
ALI23934.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
   
  
 0.593
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.