STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28597.1Ubiquinone; Menaquinone biosynthesis methyltransferase UbiE; 2-heptaprenyl-1,4-naphthoquinone methyltransferase. (207 aa)    
Predicted Functional Partners:
ALI28599.1
Hypothetical protein.
 
  
 0.923
ALI28598.1
Hypothetical protein.
       0.889
ALI28600.1
Diaminopimelate decarboxylase.
  
    0.526
ycgJ_2
SAM-dependent methyltransferase.
  
     0.424
ALI26535.1
Methyltransferase colocalized with Q.
 
 
 0.424
rebM_1
2-methyl-6-solanyl-1,4-benzoquinone methyltransferase; 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase; 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase; 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase; 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase; 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase.
 
     0.421
ALI25331.1
Putative conserved membrane protein.
       0.412
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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