Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI24010.1 | ALI28271.1 | XA26_01440 | XA26_44710 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.418 |
ALI24010.1 | ALI28685.1 | XA26_01440 | XA26_48870 | Transcriptional regulator, MarR family. | Putative DNA-binding protein. | 0.445 |
ALI24010.1 | ALI29556.1 | XA26_01440 | XA26_57710 | Transcriptional regulator, MarR family. | Transcriptional regulator, TetR family. | 0.585 |
ALI24406.1 | ALI28685.1 | XA26_05450 | XA26_48870 | Fumarylacetoacetase. | Putative DNA-binding protein. | 0.456 |
ALI24486.1 | ALI28271.1 | XA26_06260 | XA26_44710 | Hypothetical protein. | Hypothetical protein. | 0.452 |
ALI24486.1 | ALI28685.1 | XA26_06260 | XA26_48870 | Hypothetical protein. | Putative DNA-binding protein. | 0.452 |
ALI26690.1 | ALI28685.1 | XA26_28550 | XA26_48870 | Hypothetical protein. | Putative DNA-binding protein. | 0.433 |
ALI27710.1 | ALI28685.1 | XA26_38960 | XA26_48870 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative DNA-binding protein. | 0.484 |
ALI27710.1 | ALI28686.1 | XA26_38960 | XA26_48880 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Putative oxidoreductase/Short-chain dehydrogenase. | 0.443 |
ALI27710.1 | ALI29556.1 | XA26_38960 | XA26_57710 | Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Transcriptional regulator, TetR family. | 0.467 |
ALI28271.1 | ALI24010.1 | XA26_44710 | XA26_01440 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.418 |
ALI28271.1 | ALI24486.1 | XA26_44710 | XA26_06260 | Hypothetical protein. | Hypothetical protein. | 0.452 |
ALI28271.1 | ALI28685.1 | XA26_44710 | XA26_48870 | Hypothetical protein. | Putative DNA-binding protein. | 0.467 |
ALI28683.1 | ALI28684.1 | XA26_48850 | XA26_48860 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.558 |
ALI28683.1 | ALI28685.1 | XA26_48850 | XA26_48870 | Transcriptional regulator, TetR family. | Putative DNA-binding protein. | 0.474 |
ALI28684.1 | ALI28683.1 | XA26_48860 | XA26_48850 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.558 |
ALI28684.1 | ALI28685.1 | XA26_48860 | XA26_48870 | Hypothetical protein. | Putative DNA-binding protein. | 0.631 |
ALI28684.1 | ALI28686.1 | XA26_48860 | XA26_48880 | Hypothetical protein. | Putative oxidoreductase/Short-chain dehydrogenase. | 0.457 |
ALI28685.1 | ALI24010.1 | XA26_48870 | XA26_01440 | Putative DNA-binding protein. | Transcriptional regulator, MarR family. | 0.445 |
ALI28685.1 | ALI24406.1 | XA26_48870 | XA26_05450 | Putative DNA-binding protein. | Fumarylacetoacetase. | 0.456 |
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