STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28719.1Isovaleryl-CoA dehydrogenase. (385 aa)    
Predicted Functional Partners:
ALI28718.1
Methylcrotonyl-CoA carboxylase biotin-containing subunit.
 
 
 0.985
ALI28717.1
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
  
 0.965
echA7
Methylglutaconyl-CoA hydratase.
  
 0.959
ALI28716.1
Isovaleryl-CoA dehydrogenase.
 
  
0.945
ALI28715.1
Expressed protein.
 
  
 0.923
ALI29508.1
Acyl-CoA dehydrogenase FadE36.
 
 
 0.906
ALI24979.1
Enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 0.727
etfB
Electron transfer flavoprotein, beta subunit.
 
 0.713
fixB
Electron transfer flavoprotein, alpha subunit.
 
 0.693
ALI25249.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.646
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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