STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI28849.1Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (362 aa)    
Predicted Functional Partners:
ALI24534.1
Aldose 1-epimerase.
  
 0.982
ALI28850.1
Lysophospholipase-like family protein.
 
     0.818
ALI23934.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
     
 0.809
ALI28698.1
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.806
ALI24524.1
Hypothetical protein.
 
  
 0.764
ALI28089.1
Putative transcription regulator, LacI family.
 
  
 0.685
rpsL
SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
     
 0.653
ALI24603.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
 
  
 0.627
ALI29878.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
 
   
 0.626
ALI27122.1
Hypothetical protein.
 
  
 0.620
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.