Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI27095.1 | ALI28954.1 | XA26_32660 | XA26_51600 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | O-succinylbenzoic acid--CoA ligase. | 0.944 |
ALI27095.1 | menA | XA26_32660 | XA26_51710 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.520 |
ALI27095.1 | menB | XA26_32660 | XA26_51490 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.738 |
ALI27095.1 | menC | XA26_32660 | XA26_51380 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.914 |
ALI27095.1 | menD | XA26_32660 | XA26_51340 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.808 |
ALI27095.1 | menG | XA26_32660 | XA26_51270 | O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Ubiquinone; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.428 |
ALI28933.1 | ALI28934.1 | XA26_51390 | XA26_51400 | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | Long-chain-fatty-acid--CoA ligase. | 0.646 |
ALI28933.1 | ALI28935.1 | XA26_51390 | XA26_51410 | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | Amidohydrolase family protein. | 0.608 |
ALI28933.1 | ALI28937.1 | XA26_51390 | XA26_51430 | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | PhnB protein. | 0.407 |
ALI28933.1 | menC | XA26_51390 | XA26_51380 | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.754 |
ALI28933.1 | menD | XA26_51390 | XA26_51340 | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.420 |
ALI28934.1 | ALI28933.1 | XA26_51400 | XA26_51390 | Long-chain-fatty-acid--CoA ligase. | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | 0.646 |
ALI28934.1 | ALI28935.1 | XA26_51400 | XA26_51410 | Long-chain-fatty-acid--CoA ligase. | Amidohydrolase family protein. | 0.774 |
ALI28934.1 | ALI28937.1 | XA26_51400 | XA26_51430 | Long-chain-fatty-acid--CoA ligase. | PhnB protein. | 0.512 |
ALI28934.1 | menC | XA26_51400 | XA26_51380 | Long-chain-fatty-acid--CoA ligase. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.632 |
ALI28935.1 | ALI28933.1 | XA26_51410 | XA26_51390 | Amidohydrolase family protein. | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | 0.608 |
ALI28935.1 | ALI28934.1 | XA26_51410 | XA26_51400 | Amidohydrolase family protein. | Long-chain-fatty-acid--CoA ligase. | 0.774 |
ALI28935.1 | ALI28937.1 | XA26_51410 | XA26_51430 | Amidohydrolase family protein. | PhnB protein. | 0.542 |
ALI28935.1 | menC | XA26_51410 | XA26_51380 | Amidohydrolase family protein. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.698 |
ALI28937.1 | ALI28933.1 | XA26_51430 | XA26_51390 | PhnB protein. | Antigen 85-C precursor (85C); Antigen 85 complex C (Ag85C) (Mycolyl transferase 85C). | 0.407 |
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