Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI29090.1 | ALI29091.1 | XA26_52980 | XA26_52990 | Hypothetical protein. | Putative ESX-1 secretion system gating protein PPE68. | 0.788 |
ALI29090.1 | igrA | XA26_52980 | XA26_53050 | Hypothetical protein. | IgrA; Belongs to the cytochrome P450 family. | 0.508 |
ALI29090.1 | igrB | XA26_52980 | XA26_53040 | Hypothetical protein. | IgrB. | 0.565 |
ALI29090.1 | igrC | XA26_52980 | XA26_53030 | Hypothetical protein. | IgrC. | 0.565 |
ALI29090.1 | igrD | XA26_52980 | XA26_53020 | Hypothetical protein. | IgrD. | 0.565 |
ALI29090.1 | igrE | XA26_52980 | XA26_53010 | Hypothetical protein. | IgrE. | 0.565 |
ALI29090.1 | igrF | XA26_52980 | XA26_53000 | Hypothetical protein. | IgrF. | 0.565 |
ALI29091.1 | ALI29090.1 | XA26_52990 | XA26_52980 | Putative ESX-1 secretion system gating protein PPE68. | Hypothetical protein. | 0.788 |
ALI29091.1 | igrA | XA26_52990 | XA26_53050 | Putative ESX-1 secretion system gating protein PPE68. | IgrA; Belongs to the cytochrome P450 family. | 0.508 |
ALI29091.1 | igrB | XA26_52990 | XA26_53040 | Putative ESX-1 secretion system gating protein PPE68. | IgrB. | 0.565 |
ALI29091.1 | igrC | XA26_52990 | XA26_53030 | Putative ESX-1 secretion system gating protein PPE68. | IgrC. | 0.565 |
ALI29091.1 | igrD | XA26_52990 | XA26_53020 | Putative ESX-1 secretion system gating protein PPE68. | IgrD. | 0.580 |
ALI29091.1 | igrE | XA26_52990 | XA26_53010 | Putative ESX-1 secretion system gating protein PPE68. | IgrE. | 0.580 |
ALI29091.1 | igrF | XA26_52990 | XA26_53000 | Putative ESX-1 secretion system gating protein PPE68. | IgrF. | 0.574 |
igrA | ALI29090.1 | XA26_53050 | XA26_52980 | IgrA; Belongs to the cytochrome P450 family. | Hypothetical protein. | 0.508 |
igrA | ALI29091.1 | XA26_53050 | XA26_52990 | IgrA; Belongs to the cytochrome P450 family. | Putative ESX-1 secretion system gating protein PPE68. | 0.508 |
igrA | igrB | XA26_53050 | XA26_53040 | IgrA; Belongs to the cytochrome P450 family. | IgrB. | 0.818 |
igrA | igrC | XA26_53050 | XA26_53030 | IgrA; Belongs to the cytochrome P450 family. | IgrC. | 0.830 |
igrA | igrD | XA26_53050 | XA26_53020 | IgrA; Belongs to the cytochrome P450 family. | IgrD. | 0.910 |
igrA | igrE | XA26_53050 | XA26_53010 | IgrA; Belongs to the cytochrome P450 family. | IgrE. | 0.927 |
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