STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igrAIgrA; Belongs to the cytochrome P450 family. (416 aa)    
Predicted Functional Partners:
igrE
IgrE.
 
   
 0.927
ALI24786.1
Putative cytochrome P450 hydroxylase.
  
  
0.926
ALI28457.1
Putative CHOLESTEROL DEHYDROGENASE.
  
 0.926
igrD
IgrD.
 
   
 0.910
ALI25473.1
Cholesterol oxidase.
    
 0.907
ALI24860.1
Putative cytochrome P450 hydroxylase.
  
  
 
0.902
ALI27131.1
Cytochrome P450-like protein.
  
  
 
0.901
igrF
IgrF.
 
 
 0.892
ALI25732.1
Long-chain-fatty-acid--CoA ligase.
  
 0.888
ALI29570.1
Putative polyketide synthase.
  
 0.872
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.