STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29098.1Putative acetyl-CoA acetyltransferase FadA5; Belongs to the thiolase-like superfamily. Thiolase family. (383 aa)    
Predicted Functional Partners:
igrC
IgrC.
 
 
 0.977
ALI24979.1
Enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
 
 0.975
ALI29033.1
3-hydroxybutyryl-CoA dehydrogenase/3-hydroxyacyl-CoA dehydrogenase.
 0.972
igrD
IgrD.
 
 
 0.956
ALI29099.1
CysQ, putative.
     
 0.947
ALI27700.1
Acyl-coenzyme A oxidase 3, peroxisomal.
  
 0.946
ALI29132.1
Acetoacetyl-CoA synthetase.
  
 
 0.940
ALI29736.1
Propionyl-CoA carboxylase beta chain.
  
 0.936
igrE
IgrE.
 
 
 0.928
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.927
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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