Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALI29259.1 | ALI29260.1 | XA26_54670 | XA26_54680 | Serine phosphatase RsbU, regulator of sigma subunit. | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | 0.986 |
ALI29259.1 | ALI29261.1 | XA26_54670 | XA26_54690 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.966 |
ALI29259.1 | ALI29262.1 | XA26_54670 | XA26_54700 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.497 |
ALI29260.1 | ALI29259.1 | XA26_54680 | XA26_54670 | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.986 |
ALI29260.1 | ALI29261.1 | XA26_54680 | XA26_54690 | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | Hypothetical protein. | 0.990 |
ALI29260.1 | ALI29262.1 | XA26_54680 | XA26_54700 | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | Hypothetical protein. | 0.524 |
ALI29260.1 | terC | XA26_54680 | XA26_54710 | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | TerC. | 0.400 |
ALI29261.1 | ALI29259.1 | XA26_54690 | XA26_54670 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.966 |
ALI29261.1 | ALI29260.1 | XA26_54690 | XA26_54680 | Hypothetical protein. | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | 0.990 |
ALI29261.1 | ALI29262.1 | XA26_54690 | XA26_54700 | Hypothetical protein. | Hypothetical protein. | 0.592 |
ALI29261.1 | terC | XA26_54690 | XA26_54710 | Hypothetical protein. | TerC. | 0.400 |
ALI29262.1 | ALI29259.1 | XA26_54700 | XA26_54670 | Hypothetical protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.497 |
ALI29262.1 | ALI29260.1 | XA26_54700 | XA26_54680 | Hypothetical protein. | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | 0.524 |
ALI29262.1 | ALI29261.1 | XA26_54700 | XA26_54690 | Hypothetical protein. | Hypothetical protein. | 0.592 |
ALI29262.1 | terC | XA26_54700 | XA26_54710 | Hypothetical protein. | TerC. | 0.563 |
terC | ALI29260.1 | XA26_54710 | XA26_54680 | TerC. | Phytochrome, two-component sensor histidine kinase; cyanobacterial phytochrome 1. | 0.400 |
terC | ALI29261.1 | XA26_54710 | XA26_54690 | TerC. | Hypothetical protein. | 0.400 |
terC | ALI29262.1 | XA26_54710 | XA26_54700 | TerC. | Hypothetical protein. | 0.563 |