STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29599.1Putative conserved integral membrane protein. (254 aa)    
Predicted Functional Partners:
ALI29598.1
Hypothetical protein.
       0.730
ALI29600.1
Cell envelope-associated transcriptional attenuator; LytR-CpsA-Psr, subfamily A1.
       0.701
ALI29804.1
ErfK/YbiS/YcfS/YnhG family protein.
     
 0.653
pheA
Prephenate dehydratase.
       0.608
ALI27136.1
Putative lipoprotein.
     
 0.577
ALI27866.1
Copper resistance protein D.
 
     0.566
ALI26767.1
ABC-type multidrug transport system, permease component.
 
  
 0.518
ALI29596.1
Putative phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
    0.501
ALI25755.1
Putative transferase; Belongs to the methyltransferase superfamily.
 
  
 0.499
lprD
LprD.
 
     0.490
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.