STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29617.1Copper resistance protein CopC precursor. (162 aa)    
Predicted Functional Partners:
ycnI
YcnI.
 
  
 0.976
ALI29618.1
Copper resistance protein D.
 
  
 0.940
ALI29727.1
Copper metallochaperone; Bacterial analog of Cox17 protein.
  
    0.913
ALI27866.1
Copper resistance protein D.
 
  
 0.860
ALI28110.1
Conserved membrane protein.
  
    0.757
ALI27752.1
Oxidoreductase; Flavoprotein.
   
   0.743
ALI29614.1
Hypothetical protein.
       0.743
ALI27905.1
PiuB-like protein.
  
    0.704
piuB
PiuB.
  
    0.704
ALI29726.1
Putative Dyp-type peroxidase; Associated with bacterial analog of Cox17 protein.
 
  
 0.703
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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