STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29623.1Transcriptional repressor EthR, TetR family. (213 aa)    
Predicted Functional Partners:
dinB-3
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.840
mshA
Glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
      
 0.803
ALI29622.1
Monooxygenase, flavin-binding family.
 
   
 0.775
kstR2_11
Transcriptional regulator, TetR family.
  
  
 0.765
ALI24361.1
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
   0.751
icaR_2
Transcriptional regulator, TetR family.
   
    0.708
ALI29118.1
Transcriptional factor; In putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids.
  
  
 0.686
ALI29600.1
Cell envelope-associated transcriptional attenuator; LytR-CpsA-Psr, subfamily A1.
   
    0.665
inhA
Enoyl-[acyl-carrier-protein] reductase.
      
 0.655
ALI25271.1
Mycofactocin system transcriptional regulator.
  
  
 0.631
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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