STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripA_3Transcriptional regulator, AraC family. (264 aa)    
Predicted Functional Partners:
ALI24449.1
Transcriptional regulator, AraC family.
  
   
 0.693
ALI24452.1
Transcriptional regulator, AraC family.
  
     0.689
ALI28918.1
Transcriptional regulator, AraC family.
  
     0.685
ALI26603.1
Transcriptional regulator, AraC family.
  
   
 0.684
ALI29534.1
Transcriptional regulator, AraC family.
  
   
 0.681
ALI24451.1
Transcriptional regulator, AraC family.
  
     0.669
ALI29703.1
Hypothetical protein.
 
     0.628
ALI28424.1
Transcriptional regulator, AraC family.
 
 
 0.483
marA_2
Transcriptional regulator, AraC family.
 
 
 0.474
ALI27100.1
Transcriptional regulator, AraC family.
 
 
 0.458
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.