STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29747.12-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase. (301 aa)    
Predicted Functional Partners:
ALI29746.1
Alpha/beta hydrolase, putative.
  
 
 0.824
ALI29718.1
Fumarylacetoacetate hydrolase family protein.
 
     0.774
ALI29750.1
Fumarylacetoacetate hydrolase family protein.
  
     0.741
ALI25919.1
Homogentisate 1,2-dioxygenase.
 
  
 0.665
ALI29744.1
Putative acyl-CoA dehydrogenase.
  
  
 0.657
ALI29745.1
Acyl-CoA dehydrogenase, short-chain specific.
  
  
 0.657
ALI29743.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
  
 0.498
ALI24760.1
Polyketide synthase.
 
 
 0.449
ALI26809.1
Polyketide synthase.
 
 
 0.448
ligD
LigD.
  
  
 0.437
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
Server load: low (28%) [HD]