STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29787.1Putative helicase. (844 aa)    
Predicted Functional Partners:
ALI27324.1
ABC transporter, ATP-binding protein.
 
     0.632
ALI29786.1
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.608
ALI29788.1
ATP-dependent DNA helicase rep.
       0.550
ALI29789.1
FAD-dependent oxidoreductase; 2-polyprenyl-6-methoxyphenol hydroxylase and related.
       0.550
ALI29790.1
Transcriptional regulator, TetR family.
       0.549
ALI23893.1
Hypothetical protein.
 
     0.540
rnd
Ribonuclease D.
 
     0.535
hprA
ATP-dependent helicase HrpA.
 
     0.531
mIHF
Integration host factor.
 
     0.489
ALI27225.1
Hypothetical protein.
 
     0.484
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.