STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29816.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
ALI29817.1
Transcriptional regulator, PadR family.
 
     0.762
ALI24656.1
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
     
 0.566
ALI25561.1
NADH:flavin oxidoreductase; Old Yellow Enzyme family.
     
 0.566
ALI26780.1
2,4-dienoyl-CoA reductase.
     
 0.566
ALI25722.1
Putative transmembrane protein.
  
     0.524
ALI27356.1
Hypothetical protein.
 
     0.522
ALI24202.1
Hypothetical protein.
 
     0.518
ALI24433.1
Putative transmembrane protein.
 
     0.498
ALI26995.1
Putative transmembrane protein.
 
     0.466
ALI25025.1
Putative transmembrane protein.
 
     0.459
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.