STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALI29866.1Putative membrane protein. (417 aa)    
Predicted Functional Partners:
ALI29867.1
Hypothetical protein.
       0.889
ALI29865.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
       0.770
ALI26597.1
Putative conserved membrane protein.
 
     0.691
ALI29291.1
Putative conserved transmembrane protein.
  
     0.627
ALI29848.1
Transcriptional regulator, PadR family.
 
   
 0.626
ALI27516.1
Putative membrane protein.
  
     0.597
ALI27033.1
Chitinase C precursor.
  
   
 0.572
ALI26344.1
N-acetyltransferase; GCN5-related.
 
     0.560
ALI26595.1
Lauroyl/myristoyl acyltransferase; Involved in lipid A biosynthesis.
 
   
 0.523
ALI29217.1
Hypothetical protein.
 
     0.491
Your Current Organism:
Mycolicibacterium fortuitum
NCBI taxonomy Id: 1766
Other names: ATCC 6841, CCUG 20994, CIP 104534, DSM 46621, IFO 13159, JCM 6387, M. fortuitum, Mycobacterium fortuitum, Mycobacterium giae, Mycobacterium minetti, NBRC 13159, NCTC 10394
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