STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001517865_00692Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_001517865_00695
Unannotated protein.
 
 0.999
GCA_001517865_00691
Unannotated protein.
 
 0.997
GCA_001517865_00693
Unannotated protein.
 
 0.997
GCA_001517865_00022
Unannotated protein.
 
 0.986
GCA_001517865_00991
Unannotated protein.
 
 0.974
GCA_001517865_00029
Unannotated protein.
 0.969
GCA_001517865_00700
Unannotated protein.
    
 0.957
GCA_001517865_00698
Unannotated protein.
  
 
0.956
GCA_001517865_00699
Unannotated protein.
  
 0.947
GCA_001517865_00992
Unannotated protein.
  
 0.932
Your Current Organism:
Caviibacter abscessus
NCBI taxonomy Id: 1766719
Other names: C. abscessus, CCUG 39713, Caviibacter abscessus Eisenberg et al. 2016, DSM 101949, Leptotrichiaceae bacterium 151011837, Leptotrichiaceae bacterium CCUG 39713, Streptobacillus moniliformis CCUG 39713
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.