STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG91155.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)    
Predicted Functional Partners:
ARG95453.1
3-(3-hydroxyphenyl)propionate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.790
ARG91153.1
2,3-dihydroxybiphenyl 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.741
ARG91154.1
Fumarylacetoacetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
ARG95190.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.640
ARG91156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.547
ARG95268.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.441
ARG91152.1
Proline hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
ARG95270.1
3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.426
ARG90785.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.401
Your Current Organism:
Mycobacterium kansasii
NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024
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