STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG92247.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)    
Predicted Functional Partners:
ARG92250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.939
ARG92246.1
Carboxymuconolactone decarboxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.900
ARG92251.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.895
ARG92249.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
ARG92252.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.876
ARG92248.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.857
ARG92245.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.852
ARG96062.1
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.815
rnoA4
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.808
ARG92234.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.719
Your Current Organism:
Mycobacterium kansasii
NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024
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