STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenide, water dikinase SelD; Synthesizes selenophosphate from selenide and ATP. (333 aa)    
Predicted Functional Partners:
ARG92751.1
L-seryl-tRNA(Sec) selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.997
ARG92752.1
Selenocysteine-specific translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.971
trxB
Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.914
sufS
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 0.911
ARG94997.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.911
B1T50_27300
Cadmium-translocating P-type ATPase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
ARG95036.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
ARG95358.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
ARG92753.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.815
ARG95773.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.767
Your Current Organism:
Mycobacterium kansasii
NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024
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