STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG93302.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
ARG93301.1
CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
 
     0.916
ARG93300.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.857
ARG93310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
ARG93299.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.764
ARG92196.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.698
ARG92245.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.693
ARG91622.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
ARG95326.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.639
ARG95560.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.610
ARG93297.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
Your Current Organism:
Mycobacterium kansasii
NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024
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