STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARG93389.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)    
Predicted Functional Partners:
ARG93038.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.884
ARG93390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.697
ARG93388.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.651
ARG93387.1
Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
odhI
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.584
ARG93035.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.498
ARG93386.1
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.466
ARG93040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.441
ARG93039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.428
Your Current Organism:
Mycobacterium kansasii
NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024
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