STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556045_01919Unannotated protein. (105 aa)    
Predicted Functional Partners:
GCA_001556045_01918
Unannotated protein.
       0.723
GCA_001556045_04451
Unannotated protein.
 
     0.685
GCA_001556045_01917
Unannotated protein.
       0.684
GCA_001556045_01916
Unannotated protein.
       0.679
GCA_001556045_01915
Unannotated protein.
       0.661
GCA_001556045_01914
Unannotated protein.
       0.601
GCA_001556045_05840
Unannotated protein.
  
     0.601
GCA_001556045_01913
Unannotated protein.
       0.589
GCA_001556045_07686
Unannotated protein.
  
     0.534
GCA_001556045_04861
Unannotated protein.
  
   
 0.463
Your Current Organism:
Bradyrhizobium sp. CCH5F6
NCBI taxonomy Id: 1768753
Other names: B. sp. CCH5-F6, Bradyrhizobium sp. CCH5-F6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.