STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556045_01992Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_001556045_01991
Unannotated protein.
     0.994
GCA_001556045_07640
Unannotated protein.
   
    0.943
GCA_001556045_01993
Unannotated protein.
 
     0.924
GCA_001556045_07630
Unannotated protein.
   
    0.847
GCA_001556045_00994
Unannotated protein.
   
    0.842
GCA_001556045_03849
Unannotated protein.
   
    0.842
GCA_001556045_07633
Unannotated protein.
   
    0.830
GCA_001556045_03848
Unannotated protein.
   
    0.824
GCA_001556045_04013
Unannotated protein.
   
    0.824
GCA_001556045_07636
Unannotated protein.
   
    0.824
Your Current Organism:
Bradyrhizobium sp. CCH5F6
NCBI taxonomy Id: 1768753
Other names: B. sp. CCH5-F6, Bradyrhizobium sp. CCH5-F6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.