STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556045_04344Unannotated protein. (152 aa)    
Predicted Functional Partners:
GCA_001556045_04342
Unannotated protein.
      0.779
GCA_001556045_04343
Unannotated protein.
  
  
 0.770
GCA_001556045_04341
Unannotated protein.
       0.668
GCA_001556045_03477
Unannotated protein.
   
    0.571
GCA_001556045_04345
Unannotated protein.
     
 0.543
GCA_001556045_04184
Unannotated protein.
  
   
 0.532
GCA_001556045_03608
Unannotated protein.
 
  
 0.502
GCA_001556045_02057
Unannotated protein.
 
    0.498
GCA_001556045_04346
Unannotated protein.
       0.488
GCA_001556045_03475
Unannotated protein.
  
    0.438
Your Current Organism:
Bradyrhizobium sp. CCH5F6
NCBI taxonomy Id: 1768753
Other names: B. sp. CCH5-F6, Bradyrhizobium sp. CCH5-F6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.