STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556025_02206Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_001556025_02205
Unannotated protein.
 
  0.975
GCA_001556025_02204
Unannotated protein.
 
  0.972
GCA_001556025_00128
Unannotated protein.
 
 0.948
GCA_001556025_02203
Unannotated protein.
 
 
  0.926
GCA_001556025_02230
Unannotated protein.
 
 
  0.919
GCA_001556025_01661
Unannotated protein.
 
 
  0.907
GCA_001556025_02207
Unannotated protein.
 
 
 
0.899
GCA_001556025_02401
Unannotated protein.
 
  0.891
GCA_001556025_00357
Unannotated protein.
 
  0.883
GCA_001556025_04917
Unannotated protein.
 
  0.873
Your Current Organism:
Rhizobiales bacterium CCH3A5
NCBI taxonomy Id: 1768796
Other names: R. bacterium CCH3-A5, Rhizobiales bacterium CCH3-A5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.