STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556025_03889Unannotated protein. (545 aa)    
Predicted Functional Partners:
GCA_001556025_03887
Unannotated protein.
 
  0.959
GCA_001556025_03884
Unannotated protein.
  
 0.945
GCA_001556025_03886
Unannotated protein.
 
     0.941
GCA_001556025_03888
Unannotated protein.
 
 
  0.917
GCA_001556025_03885
Unannotated protein.
 
 
  0.914
GCA_001556025_03890
Unannotated protein.
 
     0.904
GCA_001556025_01188
Unannotated protein.
    
  0.866
GCA_001556025_01114
Unannotated protein.
    
  0.777
GCA_001556025_01291
Unannotated protein.
    
  0.777
GCA_001556025_00892
Unannotated protein.
    
  0.751
Your Current Organism:
Rhizobiales bacterium CCH3A5
NCBI taxonomy Id: 1768796
Other names: R. bacterium CCH3-A5, Rhizobiales bacterium CCH3-A5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.