STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB69405.1Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.719
KZB60876.1
Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.710
KZB59931.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.653
KZB62623.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.645
KZB59940.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.639
KZB61453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.622
KZB69799.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.622
KZB69404.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
KZB62812.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.582
KZB62611.1
anhydro-N-acetylmuramic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.567
Your Current Organism:
Thalassospira sp. MCCC1A02491
NCBI taxonomy Id: 1769751
Other names: T. sp. MCCC 1A02491, Thalassospira sp. MCCC 1A02491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.