STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZB67195.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)    
Predicted Functional Partners:
KZB66536.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.986
KZB67196.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
KZB67198.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.964
KZB67197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KZB66532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.752
KZB58473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.661
KZB62789.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.487
KZB59197.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.482
Your Current Organism:
Thalassospira sp. MCCC1A02491
NCBI taxonomy Id: 1769751
Other names: T. sp. MCCC 1A02491, Thalassospira sp. MCCC 1A02491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.